The intersect (only overlap) tool allows you to remove the non overlapping pieces of the polygons.
Shortcut: CTRL + i
To use the Intersect (Overlap) tool, follow the steps outlined below:
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Click the Open Transformations button on the Mapping tab.
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Select the polygons to in the panel on the right or by clicking on the polygons in the map.
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Click the Intersect (Overlap) tool
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Click Save